GMEB2

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, GMEB2 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,795 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible GMEB2-associated GO terms across cancer lineages are Establishment of RNA localization, Regulation of transcription initiation by RNA polymerase II, and Epigenetic regulation of gene expression. Each is linked with GMEB2 in more than 16 cancer types. Because this analysis shows association rather than direction, both GMEB2-to-partner and partner-to-GMEB2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Establishment of RNA localization grouped by GMEB2-low versus GMEB2-high in PANCREAS.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (GMEB2→partner) and Y-score (partner→GMEB2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PANCREASEstablishment of RNA localization →+0.104+0.719<.001<.001317
PANCREASRegulation of transcription initiation by RNA polymerase II →+0.081+0.729<.001<.001317
BONEEpigenetic regulation of gene expression →+0.079+0.874.001<.001316
BONENucleic acid transport →+0.128+0.835<.001<.001316
BONERNA transport →+0.128+0.835<.001<.001316
SOFT_TISSUERegulation of DNA repair →+0.076+0.843<.001<.001316
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,795 associations by consensus.

Establishment of RNA localization by GMEB2 expression — PANCREAS

Box plot of Establishment of RNA localization in GMEB2-low vs GMEB2-high samples in PANCREAS.

Explore this box plot interactively →

Exploration