GM2AP1

Across TCGA patient cohorts, GM2AP1 RNA expression is significantly associated with the protein abundance of many other proteins, with 3,567 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible GM2AP1-associated proteins across cancer lineages are MYCBP2_S2985, NDUFAB1, and OPHN1_S652. Each is linked with GM2AP1 in more than 1 cancer types. Because this analysis shows association rather than direction, both GM2AP1-to-partner and partner-to-GM2AP1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GM2AP1 versus MYCBP2_S2985 in LSCC, with a Pearson correlation of 0.34.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GM2AP1→partner) and Y-score (partner→GM2AP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	MYCBP2_S2985 →	+0.394	+0.350	.002	<.001	3	2
HNSC	NDUFAB1 →	+0.271	+0.430	.005	.008	3	2
PDAC	OPHN1_S652 →	+0.305	+0.075	.001	.003	3	2
LSCC	NPTN →	+0.244	+0.416	<.001	.003	3	2
LUAD	ZDHHC5 →	+0.175	+0.140	.001	.007	3	2
LSCC	DSG2_S680 →	+0.675	+0.355	<.001	.003	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,567 associations by consensus.

GM2AP1 vs MYCBP2_S2985 — LSCC

Explore this scatter interactively →