GLYATL2

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, GLYATL2 RNA expression is significantly associated with the go_rna of many other GO terms, with 2,062 significant associations in total. SOFT_TISSUE shows the largest number of these associations.

The most reproducible GLYATL2-associated GO terms across cancer lineages are Negative regulation of cell cycle process, Actin-myosin filament sliding, and Immature B cell differentiation. Each is linked with GLYATL2 in more than 5 cancer types. Because this analysis shows association rather than direction, both GLYATL2-to-partner and partner-to-GLYATL2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Negative regulation of cell cycle process grouped by GLYATL2-low versus GLYATL2-high in STOMACH.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (GLYATL2→partner) and Y-score (partner→GLYATL2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STOMACHNegative regulation of cell cycle process →+0.041+0.262.007.00436
SOFT_TISSUEActin-myosin filament sliding →+0.276+0.840<.001<.00136
SOFT_TISSUEImmature B cell differentiation →+0.120+0.730<.001<.00136
KIDNEYMedium-chain fatty acid catabolic process →-0.205-1.161<.001<.00136
STOMACHRegulation of sister chromatid segregation →+0.073+0.148<.001.00435
OVARYNuclear export →+0.049+0.293.001.00435
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,062 associations by consensus.

Negative regulation of cell cycle process by GLYATL2 expression — STOMACH

Box plot of Negative regulation of cell cycle process in GLYATL2-low vs GLYATL2-high samples in STOMACH.

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Exploration