GLTPD2

Across TCGA cell cohorts, GLTPD2 mutation is significantly associated with the RNA expression of many other genes, with 3 significant associations in total. SOFT_TISSUE shows the largest number of these associations.

The most reproducible GLTPD2-associated genes across cancer lineages are GFRA4, CHP2, and BHLHA9. Each is linked with GLTPD2 in more than 1 cancer types. Because this analysis shows association rather than direction, both GLTPD2-to-partner and partner-to-GLTPD2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, GFRA4 grouped by GLTPD2-low versus GLTPD2-high in SOFT_TISSUE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GLTPD2→partner) and Y-score (partner→GLTPD2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SOFT_TISSUE	GFRA4 →	+0.014	+4.169	.003	.002	3	1
SOFT_TISSUE	CHP2 →	+0.065	+3.736	.009	.008	3	1
SOFT_TISSUE	BHLHA9 →	+0.022	+4.392	<.001	.004	3	1

Each partner links to its Q-omics profile. Showing the 3 strongest of 3 associations by consensus.

GFRA4 by GLTPD2 expression — SOFT_TISSUE

Explore this box plot interactively →