GLTP

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GLTP mutation is significantly associated with the total protein of many other genes, with 5 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GLTP-associated genes across cancer lineages are p62 Lck ligand, Caspase-7-cleavedD198, and Caspase-8. Each is linked with GLTP in more than 1 cancer types. Because this analysis shows association rather than direction, both GLTP-to-partner and partner-to-GLTP results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, p62 Lck ligand grouped by GLTP-low versus GLTP-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GLTP→partner) and Y-score (partner→GLTP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECp62 Lck ligand →+0.408+3.009.022.01931
UCECCaspase-7-cleavedD198 →+1.402+3.189<.001.01031
UCECCaspase-8 →-0.285-2.973.038.03531
UCECPCNA →+0.409+3.169<.001.02021
UCECEGFR →-0.194-3.169.027.02011
Each partner links to its Q-omics profile. Showing the 5 strongest of 5 associations by consensus.

p62 Lck ligand by GLTP expression — UCEC

Box plot of p62 Lck ligand in GLTP-low vs GLTP-high samples in UCEC.

Explore this box plot interactively →

Exploration