GLMP

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, GLMP mutation is significantly associated with the RNA expression of many other genes, with 2 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible GLMP-associated genes across cancer lineages are SPINK9 and ADAM7. Each is linked with GLMP in more than 1 cancer types. Because this analysis shows association rather than direction, both GLMP-to-partner and partner-to-GLMP results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GLMP→partner) and Y-score (partner→GLMP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINSPINK9 →+0.043+4.415<.001.00731
LARGE_INTESTINEADAM7 →+0.005+3.930<.001.00331
Each partner links to its Q-omics profile. Showing the 2 strongest of 2 associations by consensus.

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