GLI4

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, GLI4 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,374 significant associations in total. BONE shows the largest number of these associations.

The most reproducible GLI4-associated GO terms across cancer lineages are Cilium movement involved in cell motility, Cilium-dependent cell motility, and Cilium or flagellum-dependent cell motility. Each is linked with GLI4 in more than 15 cancer types. Because this analysis shows association rather than direction, both GLI4-to-partner and partner-to-GLI4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Cilium movement involved in cell motility grouped by GLI4-low versus GLI4-high in URINARY_TRACT.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (GLI4→partner) and Y-score (partner→GLI4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
URINARY_TRACTCilium movement involved in cell motility →-0.106-1.159<.001<.001316
URINARY_TRACTCilium-dependent cell motility →-0.097-1.159<.001<.001315
URINARY_TRACTCilium or flagellum-dependent cell motility →-0.097-1.159<.001<.001315
BONEPre-mRNA catabolic process →+0.221+1.588.002<.001314
BONEPositive regulation of intracellular steroid hormone receptor signaling pathway →+0.153+1.091.001.006314
URINARY_TRACTmRNA splice site recognition →+0.113+1.129<.001<.001313
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,374 associations by consensus.

Cilium movement involved in cell motility by GLI4 expression — URINARY_TRACT

Box plot of Cilium movement involved in cell motility in GLI4-low vs GLI4-high samples in URINARY_TRACT.

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Exploration