GLDN

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GLDN mutation is significantly associated with the RNA expression of many other genes, with 709 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GLDN-associated genes across cancer lineages are ACOT7, MIR147A, and AKIP1. Each is linked with GLDN in more than 2 cancer types. Because this analysis shows association rather than direction, both GLDN-to-partner and partner-to-GLDN results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GLDN→partner) and Y-score (partner→GLDN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMACOT7 →+0.485+1.945.008.00333
COADMIR147A →+0.617+4.893<.001.00532
UCECAKIP1 →+0.441+3.332.003.00532
UCECATPAF2 →+0.438+3.513<.001.00232
UCECRNF126 →+0.565+2.354<.001.00323
UCECWDR62 →+0.641+3.480.001.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 709 associations by consensus.

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