GKN2

RNA expression — cross-omics
Cross-omicsRNA → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, GKN2 RNA expression is significantly associated with the RNA expression of many other genes, with 477 significant associations in total. LUNG_NSCLC_LUAD shows the largest number of these associations.

The most reproducible GKN2-associated genes across cancer lineages are GKN1, TMEM212, and KIAA1210. Each is linked with GKN2 in more than 4 cancer types. Because this analysis shows association rather than direction, both GKN2-to-partner and partner-to-GKN2 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GKN2→partner) and Y-score (partner→GKN2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
URINARY_TRACTGKN1 →+3.918+0.849<.001<.00125
BLOOD_LymphomaTMEM212 →+0.307+0.094<.001<.00132
LARGE_INTESTINEKIAA1210 →+0.017+0.197<.001.00232
LARGE_INTESTINEAMY1C →+0.863+0.162<.001.00832
KIDNEYGLT6D1 →+0.011+0.106<.001<.00132
UPPER_AERODIGESTIVE_TRACTCCDC83 →+0.035+0.160<.001.00732
Each partner links to its Q-omics profile. Showing the 6 strongest of 477 associations by consensus.

Exploration