GJB6

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GJB6 mutation is significantly associated with the total protein of many other genes, with 36 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GJB6-associated genes across cancer lineages are MEK1, C-Raf, and 14-3-3_beta. Each is linked with GJB6 in more than 1 cancer types. Because this analysis shows association rather than direction, both GJB6-to-partner and partner-to-GJB6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MEK1 grouped by GJB6-low versus GJB6-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GJB6→partner) and Y-score (partner→GJB6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMEK1 →+0.350+2.415.017.00332
UCECC-Raf →+0.163+1.906.004.01632
UCEC14-3-3_beta →-0.129-2.401.001.00331
UCECEGFR_pY1068 →-0.243-1.906.016.01631
UCECeIF4E →+0.197+3.584.020.00231
UCECERK2 →+0.171+1.906.027.01631
Each partner links to its Q-omics profile. Showing the 6 strongest of 36 associations by consensus.

MEK1 by GJB6 expression — UCEC

Box plot of MEK1 in GJB6-low vs GJB6-high samples in UCEC.

Explore this box plot interactively →

Exploration