GIT1

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, GIT1 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,907 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible GIT1-associated GO terms across cancer lineages are Nuclear export, Nucleosome disassembly, and Pre-mRNA catabolic process. Each is linked with GIT1 in more than 12 cancer types. Because this analysis shows association rather than direction, both GIT1-to-partner and partner-to-GIT1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Nuclear export grouped by GIT1-low versus GIT1-high in LARGE_INTESTINE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (GIT1→partner) and Y-score (partner→GIT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINENuclear export →+0.080+0.984<.001<.001313
BONENucleosome disassembly →+0.230+1.367<.001<.001313
KIDNEYPre-mRNA catabolic process →+0.154+0.835<.001.006313
BONEProtein-DNA complex disassembly →+0.196+1.404<.001<.001313
BONERegulation of G0 to G1 transition →+0.145+1.227<.001<.001312
BONERegulation of nucleotide-excision repair →+0.121+1.069<.001<.001312
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,907 associations by consensus.

Nuclear export by GIT1 expression — LARGE_INTESTINE

Box plot of Nuclear export in GIT1-low vs GIT1-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration