GIMAP7

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, GIMAP7 RNA expression is significantly associated with the go_rna of many other GO terms, with 1,787 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible GIMAP7-associated GO terms across cancer lineages are Negative regulation of transcription elongation by RNA polymerase II, Response to iron ion starvation, and Negative regulation of synaptic vesicle exocytosis. Each is linked with GIMAP7 in more than 4 cancer types. Because this analysis shows association rather than direction, both GIMAP7-to-partner and partner-to-GIMAP7 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Negative regulation of transcription elongation by RNA polymerase II grouped by GIMAP7-low versus GIMAP7-high in BLOOD_Leukemia.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (GIMAP7→partner) and Y-score (partner→GIMAP7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaNegative regulation of transcription elongation by RNA polymerase II →+0.057+1.637<.001<.00135
CNSResponse to iron ion starvation →+0.098+0.014.009.00534
BLOOD_LeukemiaNegative regulation of synaptic vesicle exocytosis →+0.060+1.729.001.00234
BLOOD_LeukemiaCytokinetic process →+0.049+1.842<.001.00225
OVARYVesicle uncoating →+0.084+0.011.002.00833
LUNG_NSCLC_LUADEndoplasmic reticulum to cytosol transport →+0.073+0.020.003.00733
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,787 associations by consensus.

Negative regulation of transcription elongation by RNA polymerase II by GIMAP7 expression — BLOOD_Leukemia

Box plot of Negative regulation of transcription elongation by RNA polymerase II in GIMAP7-low vs GIMAP7-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration