GIMAP6

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GIMAP6 protein abundance is significantly associated with the RNA expression of many other genes, with 14,597 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible GIMAP6-associated genes across cancer lineages are EPSTI1, ZNF683, and FMNL1. Each is linked with GIMAP6 in more than 7 cancer types. Because this analysis shows association rather than direction, both GIMAP6-to-partner and partner-to-GIMAP6 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GIMAP6 versus EPSTI1 in HNSC, with a Pearson correlation of 0.52.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GIMAP6→partner) and Y-score (partner→GIMAP6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCEPSTI1 →+1.031+0.548<.001<.00138
BRCAZNF683 →+0.925+0.465<.001<.00138
GBMFMNL1 →+1.086+0.651<.001<.00138
UCECCYTH4 →+0.936+0.461<.001.00137
BRCAGRAP2 →+0.685+0.440<.001<.00137
LSCCCSF2RB →+0.993+0.500<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 14,597 associations by consensus.

GIMAP6 vs EPSTI1 — HNSC

Per-sample scatter of GIMAP6 vs EPSTI1 in HNSC (Pearson r = 0.52).

Explore this scatter interactively →

Exploration