GID8

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, GID8 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,561 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible GID8-associated GO terms across cancer lineages are Regulation of DNA repair, Positive regulation of stem cell population maintenance, and Regulation of transcription initiation by RNA polymerase II. Each is linked with GID8 in more than 15 cancer types. Because this analysis shows association rather than direction, both GID8-to-partner and partner-to-GID8 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of DNA repair grouped by GID8-low versus GID8-high in BONE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (GID8→partner) and Y-score (partner→GID8) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BONERegulation of DNA repair →+0.068+0.532<.001<.001316
OVARYPositive regulation of stem cell population maintenance →+0.077+0.681<.001<.001315
SOFT_TISSUERegulation of transcription initiation by RNA polymerase II →+0.074+0.813<.001<.001315
OESOPHAGUSPromoter clearance during DNA-templated transcription →+0.166+0.877.001.007315
OESOPHAGUSRNA polymerase II promoter clearance →+0.166+0.877.001.007315
OESOPHAGUSRegulation of mRNA stability →+0.070+1.152<.001<.001315
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,561 associations by consensus.

Regulation of DNA repair by GID8 expression — BONE

Box plot of Regulation of DNA repair in GID8-low vs GID8-high samples in BONE.

Explore this box plot interactively →

Exploration