GHSR

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GHSR protein abundance is significantly associated with the RNA expression of many other genes, with 308 significant associations in total. GBM shows the largest number of these associations.

The most reproducible GHSR-associated genes across cancer lineages are NIN, PCNX1, and TRADD. Each is linked with GHSR in more than 1 cancer types. Because this analysis shows association rather than direction, both GHSR-to-partner and partner-to-GHSR results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GHSR versus NIN in GBM, with a Pearson correlation of 0.88.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GHSR→partner) and Y-score (partner→GHSR) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMNIN →+0.810+0.980<.001.00231
GBMPCNX1 →+0.392+0.980.003.00231
GBMTRADD →-1.223-1.039.002<.00131
GBMNFKBIB →-0.553-1.153.002.00631
GBMPEX11G →-0.562-1.053.002<.00131
GBMZNF85 →+1.006+1.259.008<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 308 associations by consensus.

GHSR vs NIN — GBM

Per-sample scatter of GHSR vs NIN in GBM (Pearson r = 0.88).

Explore this scatter interactively →

Exploration