GGNBP2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GGNBP2 protein abundance is significantly associated with the RNA expression of many other genes, with 5,189 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible GGNBP2-associated genes across cancer lineages are FAM72D, G3BP1P1, and MTND3P25. Each is linked with GGNBP2 in more than 3 cancer types. Because this analysis shows association rather than direction, both GGNBP2-to-partner and partner-to-GGNBP2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GGNBP2 versus FAM72D in OV, with a Pearson correlation of 0.39.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GGNBP2→partner) and Y-score (partner→GGNBP2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVFAM72D →+0.884+0.191.002.00724
OVG3BP1P1 →+0.687+0.189.002.00333
OVMTND3P25 →+2.477+0.259<.001<.00133
LUADRAD51AP1 →+0.854+0.154<.001.00133
LSCCCACYBP →+0.687+0.236<.001.00133
LSCCDAP3 →+0.541+0.295<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,189 associations by consensus.

GGNBP2 vs FAM72D — OV

Per-sample scatter of GGNBP2 vs FAM72D in OV (Pearson r = 0.39).

Explore this scatter interactively →

Exploration