GGH

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GGH protein abundance is significantly associated with the RNA expression of many other genes, with 12,254 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible GGH-associated genes across cancer lineages are NCAPH, HJURP, and DLGAP5. Each is linked with GGH in more than 5 cancer types. Because this analysis shows association rather than direction, both GGH-to-partner and partner-to-GGH results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GGH versus NCAPH in OV, with a Pearson correlation of 0.43.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GGH→partner) and Y-score (partner→GGH) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVNCAPH →+0.829+0.627<.001<.00136
GBMHJURP →+1.321+0.650<.001<.00136
BRCADLGAP5 →+1.055+0.558<.001.00336
OVSGO1 →+0.934+1.144<.001<.00136
GBMKIF23 →+1.198+0.638<.001<.00136
LSCCCCDC150 →+0.767+0.389<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,254 associations by consensus.

GGH vs NCAPH — OV

Per-sample scatter of GGH vs NCAPH in OV (Pearson r = 0.43).

Explore this scatter interactively →

Exploration