GGH

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GGH mutation is significantly associated with the total protein of many other genes, with 7 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GGH-associated genes across cancer lineages are MEK1, Notch1, and c-Met_pY1235. Each is linked with GGH in more than 1 cancer types. Because this analysis shows association rather than direction, both GGH-to-partner and partner-to-GGH results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MEK1 grouped by GGH-low versus GGH-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GGH→partner) and Y-score (partner→GGH) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMEK1 →+0.475+3.000.024.03631
UCECNotch1 →+0.204+2.817.012.03631
UCECc-Met_pY1235 →+0.089+3.000.037.03731
UCECTFRC →+0.967+3.000.001.03712
UCECDi-Ras3 →-0.174-3.000.042.03721
UCEC4E-BP1_pS65 →-0.263-2.986.020.03711
Each partner links to its Q-omics profile. Showing the 6 strongest of 7 associations by consensus.

MEK1 by GGH expression — UCEC

Box plot of MEK1 in GGH-low vs GGH-high samples in UCEC.

Explore this box plot interactively →

Exploration