GGH

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, GGH RNA expression is significantly associated with the go_rna of many other GO terms, with 2,589 significant associations in total. LUNG_NSCLC_LUAD shows the largest number of these associations.

The most reproducible GGH-associated GO terms across cancer lineages are Mitotic spindle organization, Regulation of chromosome separation, and Negative regulation of metaphase/anaphase transition of cell cycle. Each is linked with GGH in more than 11 cancer types. Because this analysis shows association rather than direction, both GGH-to-partner and partner-to-GGH results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Mitotic spindle organization grouped by GGH-low versus GGH-high in OESOPHAGUS.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (GGH→partner) and Y-score (partner→GGH) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OESOPHAGUSMitotic spindle organization →+0.118+1.607.004.003312
OESOPHAGUSRegulation of chromosome separation →+0.172+1.339.001.001311
OESOPHAGUSNegative regulation of metaphase/anaphase transition of cell cycle →+0.161+1.500.001<.001311
OESOPHAGUSMicrotubule cytoskeleton organization involved in mitosis →+0.118+1.416.002.009311
OESOPHAGUSNegative regulation of chromosome separation →+0.161+1.500.001<.001311
OESOPHAGUSRegulation of nuclear division →+0.167+1.869<.001<.001311
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,589 associations by consensus.

Mitotic spindle organization by GGH expression — OESOPHAGUS

Box plot of Mitotic spindle organization in GGH-low vs GGH-high samples in OESOPHAGUS.

Explore this box plot interactively →

Exploration