GGCT

Across TCGA patient cohorts, GGCT RNA expression is significantly associated with the protein abundance of many other proteins, with 18,659 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible GGCT-associated proteins across cancer lineages are BZW2, GARS1, and PEX1. Each is linked with GGCT in more than 8 cancer types. Because this analysis shows association rather than direction, both GGCT-to-partner and partner-to-GGCT results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GGCT versus BZW2 in BRCA, with a Pearson correlation of 0.46.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GGCT→partner) and Y-score (partner→GGCT) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	BZW2 →	+0.592	+1.011	<.001	<.001	3	9
LUAD	GARS1 →	+0.300	+0.607	<.001	<.001	3	7
UCEC	PEX1 →	+0.375	+0.894	<.001	<.001	3	7
LUAD	AVL9 →	+0.384	+0.830	<.001	<.001	3	6
GBM	MCM4 →	+0.784	+0.520	<.001	<.001	3	6
BRCA	ACACA_S80 →	+0.751	+0.539	.002	.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 18,659 associations by consensus.

GGCT vs BZW2 — BRCA

Explore this scatter interactively →