GGA2

Across TCGA patient cohorts, GGA2 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,358 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible GGA2-associated proteins across cancer lineages are RFX5, NES_S352, and BBX_S844. Each is linked with GGA2 in more than 4 cancer types. Because this analysis shows association rather than direction, both GGA2-to-partner and partner-to-GGA2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GGA2 versus RFX5 in HNSC, with a Pearson correlation of 0.39.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GGA2→partner) and Y-score (partner→GGA2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	RFX5 →	+0.412	+0.590	<.001	<.001	3	5
UCEC	NES_S352 →	-1.025	-0.449	<.001	.003	3	4
BRCA	BBX_S844 →	+0.443	+0.374	.003	.004	3	4
GBM	DOK2 →	+0.876	+0.353	<.001	<.001	3	4
GBM	LCP1 →	+0.621	+0.234	<.001	<.001	3	4
HNSC	LGALS9 →	+0.590	+0.545	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 13,358 associations by consensus.

GGA2 vs RFX5 — HNSC

Explore this scatter interactively →