GFI1B

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, GFI1B mutation is significantly associated with the RNA expression of many other genes, with 4 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible GFI1B-associated genes across cancer lineages are HTR1B, CPLX4, and MAGEB10. Each is linked with GFI1B in more than 1 cancer types. Because this analysis shows association rather than direction, both GFI1B-to-partner and partner-to-GFI1B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, HTR1B grouped by GFI1B-low versus GFI1B-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GFI1B→partner) and Y-score (partner→GFI1B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEHTR1B →+0.077+4.029<.001.00431
LARGE_INTESTINECPLX4 →+0.027+4.392.001.00431
LARGE_INTESTINEMAGEB10 →+0.087+3.930<.001.00331
LUNG_NSCLC_LUADCCL18 →+0.050+4.212<.001.00731
Each partner links to its Q-omics profile. Showing the 4 strongest of 4 associations by consensus.

HTR1B by GFI1B expression — LARGE_INTESTINE

Box plot of HTR1B in GFI1B-low vs GFI1B-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration