GEMIN8

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GEMIN8 protein abundance is significantly associated with the RNA expression of many other genes, with 6,576 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible GEMIN8-associated genes across cancer lineages are SMN1, NUP155, and CENPK. Each is linked with GEMIN8 in more than 5 cancer types. Because this analysis shows association rather than direction, both GEMIN8-to-partner and partner-to-GEMIN8 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GEMIN8 versus SMN1 in HNSC, with a Pearson correlation of 0.33.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GEMIN8→partner) and Y-score (partner→GEMIN8) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCSMN1 →+0.481+0.272.003<.00136
LSCCNUP155 →+0.494+0.266.001<.00134
LSCCCENPK →+0.569+0.216.002<.00134
HNSCCDC25C →+0.925+0.341<.001<.00134
HNSCCDKN2AIPNL →+0.711+0.232.001<.00134
LSCCSMN2 →+0.732+0.286.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,576 associations by consensus.

GEMIN8 vs SMN1 — HNSC

Per-sample scatter of GEMIN8 vs SMN1 in HNSC (Pearson r = 0.33).

Explore this scatter interactively →

Exploration