GEMIN5

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GEMIN5 protein abundance is significantly associated with the RNA expression of many other genes, with 15,022 significant associations in total. GBM shows the largest number of these associations.

The most reproducible GEMIN5-associated genes across cancer lineages are CENPH, PTTG1, and KIF20A. Each is linked with GEMIN5 in more than 9 cancer types. Because this analysis shows association rather than direction, both GEMIN5-to-partner and partner-to-GEMIN5 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GEMIN5 versus CENPH in HNSC, with a Pearson correlation of 0.40.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GEMIN5→partner) and Y-score (partner→GEMIN5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCCENPH →+0.810+0.276<.001<.001310
UCECPTTG1 →+1.401+0.326<.001<.001310
HNSCKIF20A →+1.295+0.249<.001<.00139
BRCACSE1L →+0.777+0.284<.001<.00139
UCECCCNB1 →+0.982+0.176<.001<.00139
UCECCDC25C →+1.033+0.218<.001<.00139
Each partner links to its Q-omics profile. Showing the 6 strongest of 15,022 associations by consensus.

GEMIN5 vs CENPH — HNSC

Per-sample scatter of GEMIN5 vs CENPH in HNSC (Pearson r = 0.40).

Explore this scatter interactively →

Exploration