GDPD5

Across TCGA patient cohorts, GDPD5 protein abundance is significantly associated with the RNA expression of many other genes, with 72 significant associations in total. GBM shows the largest number of these associations.

The most reproducible GDPD5-associated genes across cancer lineages are ARRDC3, CPN1, and NUTM2F. Each is linked with GDPD5 in more than 1 cancer types. Because this analysis shows association rather than direction, both GDPD5-to-partner and partner-to-GDPD5 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GDPD5 versus ARRDC3 in GBM, with a Pearson correlation of -0.27.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GDPD5→partner) and Y-score (partner→GDPD5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	ARRDC3 →	-0.595	-0.387	.003	.007	3	1
GBM	CPN1 →	+0.043	+0.579	<.001	.002	3	1
GBM	NUTM2F →	+0.402	+0.527	.003	.003	3	1
GBM	EGR4 →	+0.640	+0.683	.003	.003	3	1
GBM	TSGA10 →	+0.467	+0.518	.008	.008	3	1
GBM	GREB1L →	+1.287	+0.604	.001	.009	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 72 associations by consensus.

GDPD5 vs ARRDC3 — GBM

Explore this scatter interactively →