GDF2

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, GDF2 RNA expression is significantly associated with the go_rna of many other GO terms, with 537 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible GDF2-associated GO terms across cancer lineages are Oxygen transport, Modulation of excitatory postsynaptic potential, and Membrane repolarization during atrial cardiac muscle cell action potential. Each is linked with GDF2 in more than 1 cancer types. Because this analysis shows association rather than direction, both GDF2-to-partner and partner-to-GDF2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Oxygen transport grouped by GDF2-low versus GDF2-high in BLOOD_Leukemia.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (GDF2→partner) and Y-score (partner→GDF2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaOxygen transport →+1.617+0.450<.001.00332
BLOOD_LeukemiaModulation of excitatory postsynaptic potential →-0.053-0.199<.001.00931
BLOOD_LeukemiaMembrane repolarization during atrial cardiac muscle cell action potential →-1.092-0.211<.001.00531
BLOOD_LeukemiaDendritic transport →+0.081+0.207<.001.00731
BLOOD_LeukemiaAtrial cardiac muscle cell membrane repolarization →-1.092-0.211<.001.00531
BLOOD_LeukemiaSugar mediated signaling pathway →-0.092-0.254.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 537 associations by consensus.

Oxygen transport by GDF2 expression — BLOOD_Leukemia

Box plot of Oxygen transport in GDF2-low vs GDF2-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration