GDF15

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GDF15 RNA expression is significantly associated with the protein abundance of many other proteins, with 12,338 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible GDF15-associated proteins across cancer lineages are ARFGEF3, PGPEP1, and MISP3_S91. Each is linked with GDF15 in more than 4 cancer types. Because this analysis shows association rather than direction, both GDF15-to-partner and partner-to-GDF15 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GDF15 versus ARFGEF3 in BRCA, with a Pearson correlation of 0.47.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GDF15→partner) and Y-score (partner→GDF15) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAARFGEF3 →+0.464+1.350<.001<.00135
BRCAPGPEP1 →+0.394+1.039<.001<.00135
PDACMISP3_S91 →+0.758+1.095<.001.00135
PDACMTFR1L_S110 →+0.604+0.981<.001<.00134
GBMPHKA1_S758 →+0.769+1.280<.001<.00134
GBMASL →+0.321+1.187.005.00634
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,338 associations by consensus.

GDF15 vs ARFGEF3 — BRCA

Per-sample scatter of GDF15 vs ARFGEF3 in BRCA (Pearson r = 0.47).

Explore this scatter interactively →

Exploration