GCSHP4

Across TCGA patient cohorts, GCSHP4 RNA expression is significantly associated with the protein abundance of many other proteins, with 6,417 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible GCSHP4-associated proteins across cancer lineages are PLEC_S1581, PLEC_S1732, and NIBAN2_S681. Each is linked with GCSHP4 in more than 2 cancer types. Because this analysis shows association rather than direction, both GCSHP4-to-partner and partner-to-GCSHP4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GCSHP4 versus PLEC_S1581 in OV, with a Pearson correlation of 0.37.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GCSHP4→partner) and Y-score (partner→GCSHP4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OV	PLEC_S1581 →	+0.631	+0.251	<.001	<.001	3	3
OV	PLEC_S1732 →	+0.631	+0.251	<.001	<.001	3	3
LSCC	NIBAN2_S681 →	-0.437	-0.257	.003	.006	3	3
LSCC	CLASP2_S455 →	+0.397	+0.268	<.001	.001	3	3
CCRCC	UGDH_S476 →	-1.018	-0.382	<.001	<.001	3	3
OV	CHD2_S1688 →	-0.743	-0.213	.002	.008	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,417 associations by consensus.

GCSHP4 vs PLEC_S1581 — OV

Explore this scatter interactively →