GCNT7

Across TCGA patient cohorts, GCNT7 protein abundance is significantly associated with the RNA expression of many other genes, with 3,334 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible GCNT7-associated genes across cancer lineages are SPIRE2, MYLK2, and PAXX. Each is linked with GCNT7 in more than 3 cancer types. Because this analysis shows association rather than direction, both GCNT7-to-partner and partner-to-GCNT7 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GCNT7 versus SPIRE2 in LUAD, with a Pearson correlation of -0.51.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GCNT7→partner) and Y-score (partner→GCNT7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUAD	SPIRE2 →	-0.878	-0.579	.002	.007	2	4
GBM	MYLK2 →	-0.819	-0.624	.002	.006	3	2
PDAC	PAXX →	-0.428	-0.846	.001	.002	3	2
BRCA	SPTY2D1 →	+0.677	+1.352	.004	.005	3	2
BRCA	TSHZ2 →	+1.288	+1.598	<.001	<.001	3	2
BRCA	LIMS1-AS1 →	+0.870	+1.230	.003	.003	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,334 associations by consensus.

GCNT7 vs SPIRE2 — LUAD

Explore this scatter interactively →