GCNT2

Across TCGA patient cohorts, GCNT2 RNA expression is significantly associated with the protein abundance of many other proteins, with 16,100 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible GCNT2-associated proteins across cancer lineages are UBXN4, UFD1_S247, and YWHAB. Each is linked with GCNT2 in more than 3 cancer types. Because this analysis shows association rather than direction, both GCNT2-to-partner and partner-to-GCNT2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GCNT2 versus UBXN4 in LSCC, with a Pearson correlation of 0.52.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GCNT2→partner) and Y-score (partner→GCNT2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	UBXN4 →	+0.191	+0.949	<.001	<.001	3	4
LSCC	UFD1_S247 →	+0.694	+1.201	<.001	<.001	3	4
HNSC	YWHAB →	-0.291	-0.922	<.001	<.001	3	4
UCEC	NEDD4L →	+0.492	+0.908	<.001	<.001	3	4
LSCC	PGD →	+0.496	+1.049	<.001	<.001	3	4
HNSC	PIR →	+0.572	+1.124	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 16,100 associations by consensus.

GCNT2 vs UBXN4 — LSCC

Explore this scatter interactively →