GCK

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GCK RNA expression is significantly associated with the protein abundance of many other proteins, with 8,128 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible GCK-associated proteins across cancer lineages are HYI, SYNPO_S833, and HSPB6. Each is linked with GCK in more than 4 cancer types. Because this analysis shows association rather than direction, both GCK-to-partner and partner-to-GCK results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GCK versus HYI in BRCA, with a Pearson correlation of 0.07.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GCK→partner) and Y-score (partner→GCK) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAHYI →+0.436+0.086<.001.00325
UCECSYNPO_S833 →+0.817+0.274.001.00934
UCECHSPB6 →+0.746+0.286.001.00634
COADMRPL11 →-0.439-0.067<.001.00633
LUADMRPL15 →-0.336-0.066.002<.00133
COADMRPL3 →-0.419-0.071<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,128 associations by consensus.

GCK vs HYI — BRCA

Per-sample scatter of GCK vs HYI in BRCA (Pearson r = 0.07).

Explore this scatter interactively →

Exploration