GCH1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GCH1 mutation is significantly associated with the total protein of many other genes, with 20 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GCH1-associated genes across cancer lineages are MEK1, 4E-BP1, and 14-3-3_beta. Each is linked with GCH1 in more than 1 cancer types. Because this analysis shows association rather than direction, both GCH1-to-partner and partner-to-GCH1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MEK1 grouped by GCH1-low versus GCH1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GCH1→partner) and Y-score (partner→GCH1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMEK1 →+0.542+3.584<.001.00232
UCEC4E-BP1 →+0.320+3.199.008.00932
UCEC14-3-3_beta →-0.090-2.973.046.03531
UCECeEF2 →+0.478+2.999.002.03531
UCECEGFR_pY1068 →-0.244-3.000.031.03631
UCECA-Raf_pS299 →-0.126-2.321.019.03431
Each partner links to its Q-omics profile. Showing the 6 strongest of 20 associations by consensus.

MEK1 by GCH1 expression — UCEC

Box plot of MEK1 in GCH1-low vs GCH1-high samples in UCEC.

Explore this box plot interactively →

Exploration