GCATP1

Across TCGA patient cohorts, GCATP1 RNA expression is significantly associated with the protein abundance of many other proteins, with 15,219 significant associations in total. GBM shows the largest number of these associations.

The most reproducible GCATP1-associated proteins across cancer lineages are SMC3, SND1_S645, and PAF1. Each is linked with GCATP1 in more than 4 cancer types. Because this analysis shows association rather than direction, both GCATP1-to-partner and partner-to-GCATP1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GCATP1 versus SMC3 in LSCC, with a Pearson correlation of 0.41.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GCATP1→partner) and Y-score (partner→GCATP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	SMC3 →	+0.312	+0.415	<.001	<.001	3	5
OV	SND1_S645 →	-0.985	-0.314	.001	.004	3	5
GBM	PAF1 →	+0.208	+0.301	.004	.009	3	5
GBM	SF3B2 →	+0.185	+0.325	<.001	<.001	3	5
GBM	SMC1A →	+0.279	+0.384	<.001	<.001	3	5
GBM	HCFC1 →	+0.204	+0.425	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 15,219 associations by consensus.

GCATP1 vs SMC3 — LSCC

Explore this scatter interactively →