GBX2

mutation — cross-omics
Cross-omicsMUTATION → DRUGCell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, GBX2 mutation is significantly associated with the drug of many other genes, with 21 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible GBX2-associated genes across cancer lineages are EPZ004777, LMB_AB1, and VNLG/124. Each is linked with GBX2 in more than 1 cancer types. Because this analysis shows association rather than direction, both GBX2-to-partner and partner-to-GBX2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, EPZ004777 grouped by GBX2-low versus GBX2-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GBX2→partner) and Y-score (partner→GBX2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaEPZ004777 →-0.252-3.063.015.01531
BLOOD_LeukemiaLMB_AB1 →+0.320+3.000.002.02531
BLOOD_LeukemiaVNLG/124 →-0.525-3.000.026.02131
BLOOD_LeukemiaRefametinib →-0.684-2.999.033.02321
BLOOD_LeukemiaTamoxifen →+0.274+3.169.019.01421
BLOOD_LeukemiaAZ960 →-0.418-2.999.029.02821
Each partner links to its Q-omics profile. Showing the 6 strongest of 21 associations by consensus.

EPZ004777 by GBX2 expression — BLOOD_Leukemia

Box plot of EPZ004777 in GBX2-low vs GBX2-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration