GBP6

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, GBP6 RNA expression is significantly associated with the go_rna of many other GO terms, with 1,676 significant associations in total. URINARY_TRACT shows the largest number of these associations.

The most reproducible GBP6-associated GO terms across cancer lineages are Response to topologically incorrect protein, Cell-substrate junction organization, and Negative regulation of mast cell degranulation. Each is linked with GBP6 in more than 7 cancer types. Because this analysis shows association rather than direction, both GBP6-to-partner and partner-to-GBP6 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (GBP6→partner) and Y-score (partner→GBP6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaResponse to topologically incorrect protein →+0.046+0.121<.001.00238
URINARY_TRACTCell-substrate junction organization →+0.208+1.959<.001<.00137
URINARY_TRACTNegative regulation of mast cell degranulation →+1.460+1.282.001.00228
URINARY_TRACTCell-substrate junction assembly →+0.228+2.161<.001<.00137
OVARYRegulation of intracellular protein transport →+0.061+0.295.001.00627
BLOOD_LymphomaPositive regulation of response to cytokine stimulus →+0.075+0.114<.001.00436
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,676 associations by consensus.

Exploration