GBF1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GBF1 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,631 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible GBF1-associated proteins across cancer lineages are RIF1_S1454, SLC38A1_S52, and ABLIM1_S367. Each is linked with GBF1 in more than 3 cancer types. Because this analysis shows association rather than direction, both GBF1-to-partner and partner-to-GBF1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GBF1 versus RIF1_S1454 in BRCA, with a Pearson correlation of -0.41.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GBF1→partner) and Y-score (partner→GBF1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCARIF1_S1454 →-0.956-0.677<.001<.00133
UCECSLC38A1_S52 →-0.834-0.368<.001<.00124
PDACABLIM1_S367 →+0.825+0.338.001<.00133
OVAFG3L2 →-0.411-0.796<.001.00333
UCECSEC24C →+0.222+0.469<.001<.00133
BRCABRD4_S1126 →-0.510-0.370<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,631 associations by consensus.

GBF1 vs RIF1_S1454 — BRCA

Per-sample scatter of GBF1 vs RIF1_S1454 in BRCA (Pearson r = -0.41).

Explore this scatter interactively →

Exploration