GATAD2B

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GATAD2B protein abundance is significantly associated with the RNA expression of many other genes, with 18,540 significant associations in total. GBM shows the largest number of these associations.

The most reproducible GATAD2B-associated genes across cancer lineages are POGK, USP21, and CHTOP. Each is linked with GATAD2B in more than 9 cancer types. Because this analysis shows association rather than direction, both GATAD2B-to-partner and partner-to-GATAD2B results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GATAD2B versus POGK in HNSC, with a Pearson correlation of 0.45.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GATAD2B→partner) and Y-score (partner→GATAD2B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCPOGK →+0.593+0.288<.001<.001310
UCECUSP21 →+0.702+0.312<.001<.001310
LSCCCHTOP →+0.536+0.312<.001<.001310
HNSCETV3 →+0.769+0.338<.001<.00139
LSCCGPR89A →+0.503+0.311<.001<.00139
HNSCDCAF8 →+0.776+0.330<.001<.00139
Each partner links to its Q-omics profile. Showing the 6 strongest of 18,540 associations by consensus.

GATAD2B vs POGK — HNSC

Per-sample scatter of GATAD2B vs POGK in HNSC (Pearson r = 0.45).

Explore this scatter interactively →

Exploration