GAS2L1

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, GAS2L1 mutation is significantly associated with the RNA expression of many other genes, with 5 significant associations in total. BREAST shows the largest number of these associations.

The most reproducible GAS2L1-associated genes across cancer lineages are FAM205A, VCY1B, and DEFA4. Each is linked with GAS2L1 in more than 1 cancer types. Because this analysis shows association rather than direction, both GAS2L1-to-partner and partner-to-GAS2L1 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GAS2L1→partner) and Y-score (partner→GAS2L1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEFAM205A →+0.019+3.766.001.00431
BREASTVCY1B →+1.590+4.421<.001.00431
BREASTDEFA4 →+0.035+4.781<.001.00331
BREASTDEFB125 →+0.028+5.312<.001<.00131
LARGE_INTESTINETKTL2 →+0.046+3.187<.001.00621
Each partner links to its Q-omics profile. Showing the 5 strongest of 5 associations by consensus.

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