GARRE1

Across TCGA cell cohorts, GARRE1 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,647 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible GARRE1-associated GO terms across cancer lineages are Regulation of DNA-templated transcription initiation, Cytosolic transport, and Macroautophagy. Each is linked with GARRE1 in more than 16 cancer types. Because this analysis shows association rather than direction, both GARRE1-to-partner and partner-to-GARRE1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of DNA-templated transcription initiation grouped by GARRE1-low versus GARRE1-high in UPPER_AERODIGESTIVE_TRACT.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (GARRE1→partner) and Y-score (partner→GARRE1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UPPER_AERODIGESTIVE_TRACT	Regulation of DNA-templated transcription initiation →	+0.074	+0.954	.001	.006	3	17
STOMACH	Cytosolic transport →	+0.085	+1.701	.002	<.001	3	16
STOMACH	Macroautophagy →	+0.072	+1.086	<.001	<.001	3	16
STOMACH	Regulation of macroautophagy →	+0.074	+1.263	<.001	<.001	3	16
STOMACH	Process utilizing autophagic mechanism →	+0.071	+1.215	<.001	<.001	3	16
STOMACH	Autophagy →	+0.071	+1.215	<.001	<.001	3	16

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,647 associations by consensus.

Regulation of DNA-templated transcription initiation by GARRE1 expression — UPPER_AERODIGESTIVE_TRACT

Explore this box plot interactively →