GAREM2

Across TCGA patient cohorts, GAREM2 RNA expression is significantly associated with the protein abundance of many other proteins, with 21,950 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible GAREM2-associated proteins across cancer lineages are CEP170, HDAC2, and SFRP2. Each is linked with GAREM2 in more than 7 cancer types. Because this analysis shows association rather than direction, both GAREM2-to-partner and partner-to-GAREM2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GAREM2 versus CEP170 in COAD, with a Pearson correlation of 0.33.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GAREM2→partner) and Y-score (partner→GAREM2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
COAD	CEP170 →	+0.361	+0.346	<.001	.009	3	8
GBM	HDAC2 →	+0.364	+0.934	.001	.001	3	7
COAD	SFRP2 →	+1.670	+0.547	<.001	<.001	3	6
LSCC	SRSF12_S146 →	+1.242	+1.174	<.001	<.001	3	6
GBM	XRCC1 →	+0.347	+0.962	<.001	.001	3	5
BRCA	MTA1_S576 →	+0.702	+0.774	<.001	.002	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 21,950 associations by consensus.

GAREM2 vs CEP170 — COAD

Explore this scatter interactively →