GAREM1

Across TCGA patient cohorts, GAREM1 protein abundance is significantly associated with the RNA expression of many other genes, with 5,438 significant associations in total. GBM shows the largest number of these associations.

The most reproducible GAREM1-associated genes across cancer lineages are NUP210, RPS3AP3, and DENND3. Each is linked with GAREM1 in more than 3 cancer types. Because this analysis shows association rather than direction, both GAREM1-to-partner and partner-to-GAREM1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GAREM1 versus NUP210 in LUAD, with a Pearson correlation of -0.38.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GAREM1→partner) and Y-score (partner→GAREM1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUAD	NUP210 →	-0.622	-0.301	.009	.006	3	3
CCRCC	RPS3AP3 →	-0.643	-0.294	<.001	<.001	3	3
BRCA	DENND3 →	+0.610	+0.467	<.001	<.001	3	3
CCRCC	MEP1B →	+0.609	+0.318	<.001	<.001	2	4
GBM	FMOD →	-1.463	-0.238	<.001	.003	3	3
PDAC	PAIP2B →	+1.199	+0.294	.001	.005	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,438 associations by consensus.

GAREM1 vs NUP210 — LUAD

Explore this scatter interactively →