GAR1

Across TCGA patient cohorts, GAR1 protein abundance is significantly associated with the RNA expression of many other genes, with 16,933 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible GAR1-associated genes across cancer lineages are CXCR1, FPR1, and CXCR2. Each is linked with GAR1 in more than 7 cancer types. Because this analysis shows association rather than direction, both GAR1-to-partner and partner-to-GAR1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GAR1 versus CXCR1 in LSCC, with a Pearson correlation of -0.59.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GAR1→partner) and Y-score (partner→GAR1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	CXCR1 →	-1.192	-0.441	<.001	<.001	3	8
GBM	FPR1 →	-1.518	-0.439	<.001	<.001	3	8
LSCC	CXCR2 →	-0.981	-0.338	<.001	<.001	3	8
GBM	FCAR →	-1.037	-0.523	<.001	<.001	3	8
GBM	SAMSN1 →	-1.024	-0.365	<.001	<.001	3	7
LSCC	MEFV →	-0.753	-0.450	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 16,933 associations by consensus.

GAR1 vs CXCR1 — LSCC

Explore this scatter interactively →