GAPVD1

Across TCGA patient cohorts, GAPVD1 protein abundance is significantly associated with the RNA expression of many other genes, with 8,275 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible GAPVD1-associated genes across cancer lineages are ARPC5L, MRPS2, and SLC31A1. Each is linked with GAPVD1 in more than 7 cancer types. Because this analysis shows association rather than direction, both GAPVD1-to-partner and partner-to-GAPVD1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GAPVD1 versus ARPC5L in HNSC, with a Pearson correlation of 0.47.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GAPVD1→partner) and Y-score (partner→GAPVD1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	ARPC5L →	+0.606	+0.200	<.001	<.001	3	8
LSCC	MRPS2 →	+0.592	+0.170	<.001	.005	3	6
HNSC	SLC31A1 →	+0.540	+0.247	.001	<.001	3	6
LSCC	PRPF4 →	+0.729	+0.196	<.001	<.001	3	6
HNSC	PSMB7 →	+0.987	+0.197	.002	.001	2	7
LSCC	ZMYND19 →	+0.765	+0.223	<.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 8,275 associations by consensus.

GAPVD1 vs ARPC5L — HNSC

Explore this scatter interactively →