GAPLINC

Across TCGA patient cohorts, GAPLINC RNA expression is significantly associated with the protein abundance of many other proteins, with 15,879 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible GAPLINC-associated proteins across cancer lineages are LOXL2, CRTAP, and FN1. Each is linked with GAPLINC in more than 8 cancer types. Because this analysis shows association rather than direction, both GAPLINC-to-partner and partner-to-GAPLINC results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GAPLINC versus LOXL2 in LSCC, with a Pearson correlation of 0.57.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GAPLINC→partner) and Y-score (partner→GAPLINC) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	LOXL2 →	+0.804	+0.448	<.001	<.001	3	9
GBM	CRTAP →	+0.653	+0.542	<.001	<.001	3	7
OV	FN1 →	+1.194	+0.748	<.001	<.001	3	7
GBM	P3H1 →	+0.802	+0.614	<.001	<.001	3	7
BRCA	ZYX →	+0.405	+0.793	<.001	<.001	3	6
GBM	RCN3 →	+0.709	+0.396	.005	.003	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 15,879 associations by consensus.

GAPLINC vs LOXL2 — LSCC

Explore this scatter interactively →