GAPDHS

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, GAPDHS RNA expression is significantly associated with the go_rna of many other GO terms, with 2,018 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible GAPDHS-associated GO terms across cancer lineages are Regulation of tumor necrosis factor superfamily cytokine production, Viral gene expression, and Positive regulation of postsynaptic membrane organization. Each is linked with GAPDHS in more than 4 cancer types. Because this analysis shows association rather than direction, both GAPDHS-to-partner and partner-to-GAPDHS results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of tumor necrosis factor superfamily cytokine production grouped by GAPDHS-low versus GAPDHS-high in BREAST.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (GAPDHS→partner) and Y-score (partner→GAPDHS) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BREASTRegulation of tumor necrosis factor superfamily cytokine production →+0.065+0.034.002.00835
BREASTViral gene expression →+0.066+0.035.004.00735
SKINPositive regulation of postsynaptic membrane organization →+0.137+1.321<.001.00635
SKINPositive regulation of AMPA glutamate receptor clustering →+0.137+1.321<.001.00635
UPPER_AERODIGESTIVE_TRACTNegative regulation of hyaluronan biosynthetic process →+0.140+0.040<.001.00734
UPPER_AERODIGESTIVE_TRACTRegulation of intralumenal vesicle formation →+0.100+0.057<.001.00434
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,018 associations by consensus.

Regulation of tumor necrosis factor superfamily cytokine production by GAPDHS expression — BREAST

Box plot of Regulation of tumor necrosis factor superfamily cytokine production in GAPDHS-low vs GAPDHS-high samples in BREAST.

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