GAP43

Across TCGA patient cohorts, GAP43 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,922 significant associations in total. COAD shows the largest number of these associations.

The most reproducible GAP43-associated proteins across cancer lineages are VCL_S795, PDLIM5, and TIMP2. Each is linked with GAP43 in more than 6 cancer types. Because this analysis shows association rather than direction, both GAP43-to-partner and partner-to-GAP43 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GAP43 versus VCL_S795 in HNSC, with a Pearson correlation of 0.43.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GAP43→partner) and Y-score (partner→GAP43) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	VCL_S795 →	+0.511	+1.201	<.001	<.001	3	7
OV	PDLIM5 →	+0.734	+0.898	<.001	<.001	3	7
OV	TIMP2 →	+0.769	+0.915	<.001	<.001	3	7
PDAC	ISLR →	+0.712	+0.653	.001	.001	3	7
COAD	DPYSL3 →	+0.728	+0.973	<.001	<.001	3	7
OV	VCAN →	+1.536	+0.873	<.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 13,922 associations by consensus.

GAP43 vs VCL_S795 — HNSC

Explore this scatter interactively →