GALNTL6

Across TCGA cell cohorts, GALNTL6 mutation is significantly associated with the RNA expression of many other genes, with 197 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible GALNTL6-associated genes across cancer lineages are KRTAP10-10, KRT71, and PBOV1. Each is linked with GALNTL6 in more than 1 cancer types. Because this analysis shows association rather than direction, both GALNTL6-to-partner and partner-to-GALNTL6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, KRTAP10-10 grouped by GALNTL6-low versus GALNTL6-high in OESOPHAGUS.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GALNTL6→partner) and Y-score (partner→GALNTL6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OESOPHAGUS	KRTAP10-10 →	+0.020	+4.906	<.001	.006	3	1
BLOOD_Lymphoma	KRT71 →	+0.009	+4.643	<.001	.005	3	1
SKIN	PBOV1 →	+0.009	+3.196	.006	.007	3	1
LARGE_INTESTINE	RAB3A →	+0.969	+3.299	.001	.004	3	1
LARGE_INTESTINE	SH3GL2 →	+1.345	+3.667	<.001	<.001	3	1
LARGE_INTESTINE	PCCB →	+0.647	+3.125	<.001	.008	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 197 associations by consensus.

KRTAP10-10 by GALNTL6 expression — OESOPHAGUS

Explore this box plot interactively →