GALNT6

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GALNT6 RNA expression is significantly associated with the protein abundance of many other proteins, with 19,083 significant associations in total. GBM shows the largest number of these associations.

The most reproducible GALNT6-associated proteins across cancer lineages are ABRACL, GALNT7, and GNPNAT1. Each is linked with GALNT6 in more than 4 cancer types. Because this analysis shows association rather than direction, both GALNT6-to-partner and partner-to-GALNT6 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GALNT6 versus ABRACL in UCEC, with a Pearson correlation of 0.33.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GALNT6→partner) and Y-score (partner→GALNT6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECABRACL →+0.478+0.891.006.00735
BRCAGALNT7 →+0.613+1.614<.001<.00135
BRCAGNPNAT1 →+0.410+0.990.001.00835
BRCANFIB →-0.616-1.234<.001.00134
COADVPS26A →+0.212+0.978<.001<.00134
HNSCWDR44 →+0.212+1.120.003<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 19,083 associations by consensus.

GALNT6 vs ABRACL — UCEC

Per-sample scatter of GALNT6 vs ABRACL in UCEC (Pearson r = 0.33).

Explore this scatter interactively →

Exploration