GALNT6

Across TCGA patient cohorts, GALNT6 mutation is significantly associated with the RNA expression of many other genes, with 2,405 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GALNT6-associated genes across cancer lineages are SDHCP1, MSANTD3, and RN7SKP252. Each is linked with GALNT6 in more than 2 cancer types. Because this analysis shows association rather than direction, both GALNT6-to-partner and partner-to-GALNT6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SDHCP1 grouped by GALNT6-low versus GALNT6-high in LUAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GALNT6→partner) and Y-score (partner→GALNT6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUAD	SDHCP1 →	+0.250	+3.734	<.001	.003	3	3
UCEC	MSANTD3 →	+0.582	+2.818	<.001	<.001	3	3
COAD	RN7SKP252 →	+0.315	+4.927	<.001	.002	3	3
COAD	H3P34 →	+0.284	+4.109	<.001	.007	3	3
COAD	MIR8076 →	+0.571	+4.109	<.001	.007	3	3
UCEC	RNU6-1213P →	+0.213	+3.555	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,405 associations by consensus.

SDHCP1 by GALNT6 expression — LUAD

Explore this box plot interactively →