GALNT5

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GALNT5 protein abundance is significantly associated with the RNA expression of many other genes, with 13,088 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible GALNT5-associated genes across cancer lineages are RN7SKP281, CARD6, and P4HA3. Each is linked with GALNT5 in more than 5 cancer types. Because this analysis shows association rather than direction, both GALNT5-to-partner and partner-to-GALNT5 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GALNT5 versus RN7SKP281 in LSCC, with a Pearson correlation of 0.79.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GALNT5→partner) and Y-score (partner→GALNT5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCRN7SKP281 →+0.972+0.745<.001<.00136
GBMCARD6 →+0.811+0.780.002<.00135
BRCAP4HA3 →+1.391+0.754<.001<.00135
COADCREB3L1 →+1.787+0.534<.001<.00135
GBMANTXR2 →+0.911+0.889.002.00335
GBMPPIC →+1.181+1.276<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,088 associations by consensus.

GALNT5 vs RN7SKP281 — LSCC

Per-sample scatter of GALNT5 vs RN7SKP281 in LSCC (Pearson r = 0.79).

Explore this scatter interactively →

Exploration